PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_9207013g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 199aa    MW: 22711.5 Da    PI: 5.0987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_9207013g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.3e-05130159536
                      HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS CS
              HLH   5 hnerErrRRdriNsafeeLrellPk.askapsk 36 
                      h + Er+RR ++ + ++ Lr l+P  +   +++
  MA_9207013g0020 130 HVIGERKRRGQMSNILSALRALVPVkP---KAG 159
                      7778********************955...433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.144125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-11127190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-9129194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.70E-6129179No hitNo description
SMARTSM003530.001131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MRSPRSSPKL FLSDTYEKSM DTVDRTTIDD YEVCELDFFD PMTNCQAESF ESAAADYPCY  60
CLPSQSWNDF ASSDLLIHSQ MAIDNAHPSV QSEDSIITVS TEGINSNWED LRFNQKRNSA  120
FVEWKLAIHH VIGERKRRGQ MSNILSALRA LVPVKPKAGR VTVILETKDY VIHLNKHIQQ  180
LEQRNRELEA LLSEISSVT
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1236334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.11e-07bHLH family protein